%global packname  preprocessCore
%global bioc     2.4

Name:             R-%{packname}
Version:          1.6.0
Release:          2%{?dist}
Summary:          A collection of pre-processing functions

Group:            Applications/Engineering 
License:          LGPLv2+  
URL:              http://bioconductor.org/packages/%{bioc}/bioc/html/%{packname}.html
Source0:          http://bioconductor.org/packages/%{bioc}/bioc/src/contrib/%{packname}_%{version}.tar.gz
Source1:          preprocessCore_license
BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)

Requires:         R-methods
Requires(post):   R
Requires(postun): R
BuildRequires:    R-devel tetex-latex R-methods 

%package           devel
Summary:           Development files for %{name}        
Group:             Development/Libraries
Requires:          %{name} = %{version} 


%description
A library of core preprocessing routines

%description    devel
The %{name}-devel  package contains Header and libraries files for
developing applications that use %{name}

%prep
%setup -q -c -n %{packname}

%build

%install
rm -rf %{buildroot}

mkdir -p %{buildroot}%{_libdir}/R/library 
R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_libdir}/R/library/R.css

## Keep the headers of place for the -devel
## see: https://www.redhat.com/archives/fedora-r-devel-list/2009-March/msg00001.html

install -m 664 -p %{SOURCE1}  %{buildroot}%{_libdir}/R/library/%{packname}

%check
%{_bindir}/R CMD check %{packname}

%clean
rm -rf %{buildroot}

%post
%{_R_make_search_index}

%postun
%{_R_make_search_index}

%files
%defattr(-, root, root, -)
#i386 arch
%dir %{_libdir}/R/library/%{packname}
%doc %{_libdir}/R/library/%{packname}/latex
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/man
%doc %{_libdir}/R/library/%{packname}/preprocessCore_license
%{_libdir}/R/library/%{packname}/CONTENTS
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/Meta
%{_libdir}/R/library/%{packname}/R
%{_libdir}/R/library/%{packname}/libs
%{_libdir}/R/library/%{packname}/R-ex
%{_libdir}/R/library/%{packname}/help

%files          devel
%defattr(-,root,root,-)
%{_libdir}/R/library/%{packname}/include/

%changelog
* Tue Aug 04 2009 pingou <pingou@pingoured.fr> 1.6.0-2
- Add the file preprocessCore_license which contains the mail from upstream regarding the license

* Sat Aug 01 2009 pingou <pingou@pingoured.fr> 1.6.0-1
- initial package for Fedora