/* Found 301 packages */
xps -> methods;
edd -> methods;
edd -> golubEsets;
edd -> Biobase;
edd -> class;
edd -> nnet;
edd -> xtable;
Biostrings -> methods;
Biostrings -> stats;
LMGene -> Biobase;
LMGene -> multtest;
LMGene -> survival;
genefilter -> methods;
genefilter -> Biobase;
genefilter -> survival;
Icens -> survival;
iterativeBMAsurv -> BMA;
iterativeBMAsurv -> leaps;
iterativeBMAsurv -> survival;
iterativeBMAsurv -> splines;
Rtreemix -> methods;
Rtreemix -> graph;
Rtreemix -> Biobase;
maCorrPlot -> lattice;
pickgene -> MASS;
Harshlight -> affy;
Harshlight -> altcdfenvs;
nem -> e1071;
nem -> graph;
nem -> Rgraphviz;
nem -> RBGL;
nem -> time;
nem -> cluster;
nem -> bootstrap;
nem -> RColorBrewer;
nem -> plotrix;
apComplex -> graph;
apComplex -> RBGL;
apComplex -> Rgraphviz;
apComplex -> org.Sc.sgd.db;
annotate -> methods;
annotate -> Biobase;
annotate -> AnnotationDbi;
annotate -> xtable;
hexbin -> methods;
hexbin -> stats;
hexbin -> grid;
hexbin -> lattice;
EBImage -> methods;
EBImage -> graphics;
EBImage -> stats;
EBImage -> utils;
hypergraph -> methods;
hypergraph -> graph;
made4 -> ade4;
preprocessCore -> methods;
exonmap -> affy;
exonmap -> simpleaffy;
exonmap -> genefilter;
exonmap -> RColorBrewer;
exonmap -> RMySQL;
exonmap -> DBI;
exonmap -> methods;
exonmap -> plier;
bgafun -> made4;
bgafun -> seqinr;
bgafun -> ade4;
pdmclass -> Biobase;
pdmclass -> fibroEset;
pdmclass -> mda;
Ringo -> graphics;
Ringo -> methods;
Ringo -> Biobase;
Ringo -> genefilter;
Ringo -> geneplotter;
Ringo -> limma;
Ringo -> vsn;
Ringo -> RColorBrewer;
Ringo -> SparseM;
factDesign -> Biobase;
factDesign -> affy;
factDesign -> stats;
keggorth -> graph;
keggorth -> hgu95av2.db;
keggorth -> RBGL;
keggorth -> ALL;
flowClust -> methods;
flowClust -> mnormt;
flowClust -> mclust;
flowClust -> ellipse;
flowClust -> flowCore;
SIM -> fields;
SIM -> globaltest;
SIM -> marray;
SIM -> quantsmooth;
SIM -> clac;
MVCClass -> methods;
pamr -> cluster;
pamr -> survival;
SemSim -> GO;
SemSim -> annotate;
SLqPCR -> stats;
SLqPCR -> RColorBrewer;
affyQCReport -> Biobase;
affyQCReport -> affy;
affyQCReport -> simpleaffy;
affyQCReport -> xtable;
affyQCReport -> affyPLM;
affyQCReport -> RColorBrewer;
affyQCReport -> geneplotter;
affyQCReport -> genefilter;
affyQCReport -> lattice;
Ruuid -> methods;
BiocCaseStudies -> tools;
BiocCaseStudies -> methods;
BiocCaseStudies -> utils;
BiocCaseStudies -> Biobase;
ncdfExts -> ncdf;
ncdfExts -> methods;
BufferedMatrixMethods -> BufferedMatrix;
BufferedMatrixMethods -> methods;
Rintact -> Biobase;
Rintact -> XML;
Rintact -> graph;
Rintact -> hypergraph;
Rintact -> RBGL;
Rintact -> methods;
metaArray -> MergeMaid;
RefPlus -> Biobase;
RefPlus -> affy;
RefPlus -> affyPLM;
BGmix -> KernSmooth;
CoCiteStats -> org.Hs.eg.db;
puma -> Biobase;
puma -> affy;
puma -> limma;
puma -> annotate;
puma -> ROCR;
weaver -> digest;
weaver -> tools;
weaver -> utils;
weaver -> codetools;
pkgDepTools -> methods;
pkgDepTools -> graph;
pkgDepTools -> RBGL;
annotationTools -> Biobase;
Rrsat -> methods;
affycoretools -> affy;
affycoretools -> limma;
affycoretools -> GOstats;
affycoretools -> biomaRt;
affycoretools -> gcrma;
affycoretools -> Biobase;
affycoretools -> annotate;
affycoretools -> xtable;
affycoretools -> annaffy;
affycoretools -> AnnotationDbi;
fbat -> MASS;
fbat -> GeneticsBase;
MiPP -> Biobase;
MiPP -> e1071;
MiPP -> MASS;
buildBioC -> DynDoc;
buildBioC -> tools;
VanillaICE -> SNPchip;
VanillaICE -> oligoClasses;
VanillaICE -> Biobase;
VanillaICE -> methods;
beadarraySNP -> methods;
beadarraySNP -> tools;
beadarraySNP -> Biobase;
beadarraySNP -> quantsmooth;
sizepower -> stats;
ontoTools -> methods;
ontoTools -> graph;
ontoTools -> SparseM;
ontoTools -> GO.db;
ontoTools -> Biobase;
ontoTools -> annotate;
EBarrays -> Biobase;
EBarrays -> utils;
EBarrays -> lattice;
EBarrays -> cluster;
xcms -> methods;
simpleaffy -> affy;
simpleaffy -> genefilter;
simpleaffy -> Biobase;
simpleaffy -> methods;
simpleaffy -> utils;
simpleaffy -> gcrma;
rfcprim -> rflowcyt;
rfcprim -> rfcdmin;
GSEABase -> methods;
GSEABase -> AnnotationDbi;
GSEABase -> Biobase;
GSEABase -> annotate;
GSEABase -> graph;
MANOR -> GLAD;
TypeInfo -> methods;
bridge -> rama;
BioMVCClass -> methods;
BioMVCClass -> MVCClass;
BioMVCClass -> Biobase;
BioMVCClass -> graph;
BioMVCClass -> Rgraphviz;
Rrefdb -> tools;
Rrefdb -> methods;
Rrefdb -> utils;
plw -> MASS;
plw -> affy;
plw -> splines;
CMA -> methods;
CMA -> stats;
CMA -> Biobase;
lapmix -> Biobase;
BeadExplorer -> widgetTools;
BeadExplorer -> affy;
BeadExplorer -> R2HTML;
BeadExplorer -> grDevices;
BeadExplorer -> tkWidgets;
BeadExplorer -> methods;
OutlierD -> Biobase;
OutlierD -> quantreg;
GeneRfold -> GeneR;
PCpheno -> ScISI;
PCpheno -> SLGI;
PCpheno -> ppiStats;
PCpheno -> ppiData;
PCpheno -> org.Sc.sgd.db;
PCpheno -> KEGG.db;
PCpheno -> GO.db;
twilight -> splines;
twilight -> stats;
twilight -> Biobase;
plateCore -> flowCore;
plateCore -> flowViz;
aCGH -> cluster;
aCGH -> survival;
aCGH -> multtest;
aCGH -> sma;
flygrid -> Rgraphviz;
flygrid -> RColorBrewer;
RpsiXML -> annotate;
RpsiXML -> XML;
RpsiXML -> Biobase;
RpsiXML -> graph;
RpsiXML -> hypergraph;
RpsiXML -> RBGL;
RpsiXML -> methods;
affyPLM -> affy;
affyPLM -> Biobase;
affyPLM -> methods;
affyPLM -> gcrma;
affyPLM -> stats;
affyPLM -> preprocessCore;
pcaMethods -> MASS;
pcaMethods -> pls;
pcaMethods -> methods;
GGBase -> methods;
GGBase -> Biobase;
GGBase -> GSEABase;
GSEAlm -> Biobase;
GeneMeta -> methods;
GeneMeta -> Biobase;
GeneMeta -> genefilter;
CORREP -> e1071;
epistasis -> methods;
epistasis -> graph;
biocViews -> methods;
biocViews -> tools;
biocViews -> graph;
biocViews -> RBGL;
biocViews -> XML;
copa -> Biobase;
copa -> methods;
LPEadj -> LPE;
adSplit -> methods;
adSplit -> graphics;
adSplit -> stats;
adSplit -> cluster;
adSplit -> multtest;
multtest -> methods;
multtest -> Biobase;
multtest -> survival;
ppiStats -> GO.db;
ppiStats -> GOstats;
ppiStats -> org.Sc.sgd.db;
ppiStats -> graph;
ppiStats -> Category;
ppiStats -> ppiData;
ppiStats -> ScISI;
ppiStats -> lattice;
ppiStats -> grid;
ppiStats -> RColorBrewer;
ppiStats -> Biobase;
ppiStats -> AnnotationDbi;
ppiStats -> methods;
GeneSelector -> methods;
GeneSelector -> stats;
GeneSelector -> Biobase;
MassSpecWavelet -> waveslim;
Rswub -> SJava;
affyExonMuncher -> AnnBuilder;
affyExonMuncher -> tcltk;
affyExonMuncher -> geneplotter;
affyExonMuncher -> tkrplot;
rtracklayer -> Biobase;
rtracklayer -> methods;
rtracklayer -> RCurl;
rtracklayer -> Biostrings;
cosmoGUI -> tkWidgets;
cosmoGUI -> cosmo;
makecdfenv -> methods;
makecdfenv -> Biobase;
makecdfenv -> affy;
makecdfenv -> utils;
makecdfenv -> affyio;
RBioinf -> graph;
RBioinf -> methods;
smoothMiner -> tools;
smoothMiner -> methods;
smoothMiner -> utils;
smoothMiner -> mgcv;
smoothMiner -> Biobase;
smoothMiner -> locfit;
smoothMiner -> Biostrings;
RbcBook1 -> Biobase;
RbcBook1 -> graph;
BufferedMatrix -> methods;
nudge -> stats;
clusterStab -> Biobase;
clusterStab -> methods;
globaltest -> methods;
globaltest -> graphics;
globaltest -> multtest;
globaltest -> AnnotationDbi;
globaltest -> annotate;
affyPara -> affy;
affyPara -> snow;
Ratlpow -> methods;
Ratlpow -> limma;
timecourse -> limma;
timecourse -> MASS;
timecourse -> Biobase;
timecourse -> methods;
dualKS -> Biobase;
dualKS -> affy;
dualKS -> methods;
flowUtils -> flowCore;
flowUtils -> Biobase;
flowUtils -> XML;
ITALICS -> GLAD;
ITALICS -> ITALICSData;
ITALICS -> oligo;
ITALICS -> affxparser;
ITALICS -> pd.mapping50k.xba240;
ITALICS -> pd.mapping50k.hind240;
ITALICS -> pd.mapping250k.sty;
ITALICS -> pd.mapping250k.nsp;
rsbml -> graph;
rsbml -> methods;
rsbml -> utils;
widgetTools -> methods;
widgetTools -> utils;
widgetTools -> tcltk;
GeneticsDesign -> combinat;
GeneticsDesign -> gdata;
GeneticsDesign -> gmodels;
GeneticsDesign -> gtools;
GeneticsDesign -> mvtnorm;
sscore -> affy;
GGtools -> methods;
GGtools -> Biobase;
GGtools -> GGBase;
GGtools -> hgfocus.db;
GGtools -> ;
oneChannelGUI -> Biobase;
oneChannelGUI -> affylmGUI;
oneChannelGUI -> tkWidgets;
flowCore -> methods;
flowCore -> rrcov;
flowCore -> feature;
flowCore -> Biobase;
ROC -> utils;
ROC -> methods;
affylmGUI -> limma;
affylmGUI -> tcltk;
affylmGUI -> affy;
affylmGUI -> Biobase;
affylmGUI -> affyio;
maSigPro -> Biobase;
beadarray -> limma;
beadarray -> Biobase;
beadarray -> methods;
beadarray -> geneplotter;
beadarray -> affy;
altcdfenvs -> methods;
altcdfenvs -> Biobase;
altcdfenvs -> affy;
altcdfenvs -> matchprobes;
altcdfenvs -> makecdfenv;
altcdfenvs -> Biostrings;
altcdfenvs -> hypergraph;
cghMCR -> methods;
cghMCR -> DNAcopy;
cghMCR -> marray;
cghMCR -> arrayQuality;
GeneticsBase -> methods;
GeneticsBase -> combinat;
GeneticsBase -> xtable;
GeneticsBase -> mvtnorm;
GeneticsBase -> haplo.stats;
SBMLR -> XML;
SBMLR -> odesolve;
GeneTraffic -> Biobase;
GeneTraffic -> affy;
GeneTraffic -> marray;
AnnotationDbi -> methods;
AnnotationDbi -> utils;
AnnotationDbi -> Biobase;
AnnotationDbi -> DBI;
AnnotationDbi -> RSQLite;
PROcess -> Icens;
SMAP -> methods;
cosmo -> methods;
cosmo -> utils;
cosmo -> seqLogo;
arrayQuality -> marray;
arrayQuality -> limma;
arrayQuality -> convert;
arrayQuality -> hexbin;
arrayQuality -> gridBase;
arrayQuality -> RColorBrewer;
ShortRead -> methods;
ShortRead -> Biostrings;
ShortRead -> Biobase;
ShortRead -> lattice;
flowViz -> flowCore;
flowViz -> RColorBrewer;
flowViz -> lattice;
flowViz -> latticeExtra;
ABarray -> Biobase;
ABarray -> multtest;
ABarray -> tcltk;
DynDoc -> methods;
DynDoc -> utils;
SAGx -> stats;
SAGx -> multtest;
SAGx -> methods;
DEDS -> methods;
tilingArray -> methods;
tilingArray -> Biobase;
tilingArray -> affy;
tilingArray -> RColorBrewer;
snpMatrix -> survival;
snpMatrix -> methods;
biomaRt -> methods;
biomaRt -> RCurl;
oligo -> methods;
oligo -> Biobase;
AffyCompatible -> XML;
AffyCompatible -> RCurl;
AffyCompatible -> methods;
logicFS -> LogicReg;
bgx -> Biobase;
bgx -> affy;
bgx -> gcrma;
OCplus -> akima;
OCplus -> multtest;
plgem -> Biobase;
plgem -> MASS;
OrderedList -> Biobase;
OrderedList -> twilight;
bioDist -> methods;
bioDist -> Biobase;
widgetInvoke -> methods;
widgetInvoke -> XML;
widgetInvoke -> RGtk;
hopach -> cluster;
hopach -> Biobase;
hopach -> methods;
reb -> Biobase;
reb -> idiogram;
rbsurv -> Biobase;
rbsurv -> survival;
AffyExpress -> affy;
AffyExpress -> limma;
oligoClasses -> Biobase;
RBGL -> graph;
RBGL -> methods;
simulatorAPMS -> graph;
simulatorAPMS -> apComplex;
simulatorAPMS -> Rgraphviz;
simulatorAPMS -> ScISI;
simulatorAPMS -> ppiStats;
ecolitk -> affy;
ecolitk -> ecoliLeucine;
ecolitk -> ecolicdf;
ecolitk -> Biobase;
stam -> GO.db;
stam -> Biobase;
stam -> pamr(>=;
GraphAT -> MCMCpack;
GraphAT -> graph;
AnnBuilder -> methods;
AnnBuilder -> Biobase;
AnnBuilder -> XML;
AnnBuilder -> annotate;
AnnBuilder -> utils;
RDocBook -> tools;
RDocBook -> methods;
RDocBook -> utils;
MLInterfaces -> Biobase;
MLInterfaces -> MASS;
MLInterfaces -> methods;
MLInterfaces -> genefilter;
MLInterfaces -> rpart;
MLInterfaces -> rda;
MLInterfaces -> annotate;
prism -> EBImage;
rflowcyt -> survival;
rflowcyt -> xtable;
rflowcyt -> stats;
rflowcyt -> KernSmooth;
rflowcyt -> MASS;
rflowcyt -> grid;
rflowcyt -> methods;
ArrayExpress -> Biobase;
ArrayExpress -> affy;
ArrayExpress -> limma;
ArrayExpress -> Biostrings;
RdbiPgSQL -> Rdbi;
RSNPper -> methods;
RSNPper -> utils;
RSNPper -> tools;
RSNPper -> XML;
biocGraph -> graph;
biocGraph -> geneplotter;
biocGraph -> Rgraphviz;
biocGraph -> Biobase;
biocGraph -> fibroEset;
biocGraph -> hgu95av2.db;
biocGraph -> methods;
OLINgui -> OLIN;
pcot2 -> grDevices;
pcot2 -> Biobase;
pcot2 -> amap;
iterativeBMA -> BMA;
iterativeBMA -> leaps;
iterativeBMA -> Biobase;
prada -> Biobase;
prada -> RColorBrewer;
prada -> grid;
prada -> methods;
prada -> rrcov;
gaggle -> rJava;
gaggle -> graph;
gaggle -> RUnit;
annaffy -> methods;
annaffy -> Biobase;
annaffy -> GO.db;
annaffy -> KEGG.db;
safe -> SparseM;
safe -> GO;
safe -> annotate;
safe -> Biobase;
biocSurvey -> tools;
biocSurvey -> methods;
biocSurvey -> utils;
biocSurvey -> graph;
biocSurvey -> RBGL;
Biobase -> tools;
Biobase -> methods;
Biobase -> utils;
vsn -> methods;
vsn -> lattice;
vsn -> Biobase;
vsn -> affy;
vsn -> limma;
daMA -> MASS;
spikeLI -> utils;
miRNApath -> methods;
qvalue -> tcltk;
CALIB -> limma;
CALIB -> methods;
pathRender -> graph;
pathRender -> Rgraphviz;
pathRender -> RColorBrewer;
pathRender -> cMAP;
pathRender -> AnnotationDbi;
BCRANK -> methods;
HEM -> Biobase;
HELP -> stats;
HELP -> graphics;
HELP -> grDevices;
HELP -> Biobase;
GOstats -> graph;
GOstats -> GO.db;
GOstats -> annotate;
GOstats -> RBGL;
ssize -> gdata;
ssize -> xtable;
graphPart -> arules;
graphPart -> graph;
graphPart -> hypergraph;
graphPart -> methods;
makePlatformDesign -> affyio;
makePlatformDesign -> oligo;
ctc -> amap;
convert -> Biobase;
convert -> limma;
convert -> marray;
convert -> utils;
convert -> methods;
snapCGH -> limma;
snapCGH -> tilingArray;
snapCGH -> DNAcopy;
snapCGH -> GLAD;
snapCGH -> cluster;
snapCGH -> methods;
snapCGH -> aCGH;
OLIN -> methods;
OLIN -> stats;
OLIN -> locfit;
OLIN -> Biobase;
OLIN -> marray;
goTools -> Biobase;
goTools -> annotate;
goTools -> GO;
sagenhaft -> SparseM;
yaqcaffy -> simpleaffy;
yaqcaffy -> methods;
yaqcaffy -> geneplotter;
GEOquery -> methods;
GEOquery -> Biobase;
GEOquery -> RCurl;
plier -> affy;
plier -> methods;
nnNorm -> nnet;
nnNorm -> marray;
affyio -> methods;
GEOmetadb -> GEOquery;
GEOmetadb -> RSQLite;
stepNorm -> marray;
stepNorm -> MASS;
stepNorm -> methods;
gaga -> Biobase;
gaga -> coda;
goProfiles -> Biobase;
goProfiles -> AnnotationDbi;
goProfiles -> GO.db;
panp -> affy;
panp -> Biobase;
geneRecommender -> Biobase;
topGO -> methods;
geneplotter -> Biobase;
geneplotter -> methods;
geneplotter -> lattice;
geneplotter -> annotate;
mdqc -> cluster;
mdqc -> MASS;
GeneSpring -> Biobase;
GeneSpring -> methods;
spkTools -> Biobase;
spkTools -> RColorBrewer;
spkTools -> gtools;
spkTools -> geneplotter;
spkTools -> affy;
spkTools -> SpikeIn;
spkTools -> hgu133atagcdf;
GeneticsPed -> gdata;
GeneticsPed -> genetics;
GeneticsPed -> MASS;
KEGGSOAP -> methods;
KEGGSOAP -> XML;
KEGGSOAP -> SSOAP;
KEGGSOAP -> RCurl;
webbioc -> Biobase;
webbioc -> affy;
webbioc -> multtest;
webbioc -> annaffy;
webbioc -> vsn;
webbioc -> gcrma;
webbioc -> qvalue;
GlobalAncova -> methods;
GlobalAncova -> corpcor;
GlobalAncova -> globaltest;
ACME -> methods;
PGSEA -> methods;
PGSEA -> Biobase;
PGSEA -> Ruuid;
BSgenome -> methods;
BSgenome -> Biobase;
BSgenome -> Biostrings;
RMAGEML -> methods;
RMAGEML -> marray;
RMAGEML -> limma;
RMAGEML -> Biobase;
quantsmooth -> quantreg;
quantsmooth -> lodplot;
quantsmooth -> grid;
MergeMaid -> survival;
MergeMaid -> Biobase;
MergeMaid -> MASS;
MergeMaid -> methods;
cellHTS2 -> prada;
cellHTS2 -> RColorBrewer;
cellHTS2 -> Biobase;
cellHTS2 -> methods;
cellHTS2 -> genefilter;
cellHTS2 -> splots;
cellHTS2 -> vsn;
limmaGUI -> limma;
limmaGUI -> tcltk;
maDB -> Biobase;
maDB -> affy;
maDB -> pgUtils;
maDB -> limma;
maDB -> methods;
macat -> Biobase;
macat -> annotate;
pdInfoBuilder -> methods;
pdInfoBuilder -> Biobase;
affycomp -> methods;
affycomp -> Biobase;
SNPchip -> Biobase;
SNPchip -> methods;
SNPchip -> oligoClasses;
splots -> grid;
seqLogo -> methods;
seqLogo -> grid;
splicegear -> methods;
splicegear -> utils;
splicegear -> grid;
splicegear -> Biobase;
splicegear -> XML;
Category -> methods;
Category -> Biobase;
Category -> graph;
genArise -> locfit;
genArise -> tkrplot;
genArise -> xtable;
genArise -> methods;
idiogram -> methods;
idiogram -> Biobase;
idiogram -> annotate;
idiogram -> plotrix;
ScISI -> methods;
ScISI -> apComplex;
ScISI -> GO.db;
ScISI -> GOstats;
ScISI -> graph;
ScISI -> RBGL;
ScISI -> Rgraphviz;
codelink -> methods;
codelink -> Biobase;
codelink -> limma;
codelink -> annotate;
codelink -> genefilter;
siggenes -> methods;
siggenes -> multtest;
siggenes -> Biobase;
siggenes -> splines;
flowDB -> flowCore;
flowDB -> Biobase;
flowDB -> XML;
rHVDM -> R2HTML;
rHVDM -> affy;
rHVDM -> minpack.lm;
rHVDM -> Biobase;
RWebServices -> SJava;
RWebServices -> TypeInfo;
RWebServices -> methods;
RWebServices -> tools;
tkWidgets -> methods;
tkWidgets -> widgetTools;
tkWidgets -> DynDoc(>=;
Mfuzz -> Biobase;
Mfuzz -> e1071;
cellHTS -> prada;
cellHTS -> RColorBrewer;
cellHTS -> Biobase;
cellHTS -> genefilter;
externalVector -> methods;
externalVector -> stats;
XDE -> Biobase;
XDE -> methods;
XDE -> graphics;
SLGI -> ScISI;
SLGI -> lattice;
SLGI -> methods;
SLGI -> org.Sc.sgd.db;
SLGI -> GO.db;
graph -> methods;
lumi -> affy;
lumi -> mgcv;
lumi -> methods;
matchprobes -> Biobase;
matchprobes -> affy;
Resourcerer -> Biobase;
Resourcerer -> AnnBuilder;
SAGElyzer -> AnnBuilder;
SAGElyzer -> tkWidgets;
SAGElyzer -> genefilter;
SAGElyzer -> annotate;
SAGElyzer -> Biobase;
SAGElyzer -> tcltk;
limma -> methods;
HilbertCurveDisplay -> lattice;
maigesPack -> convert;
maigesPack -> graph;
maigesPack -> limma;
maigesPack -> marray;
maigesPack -> methods;
flowQ -> outliers;
flowQ -> lattice;
flowQ -> flowViz;
gcrma -> Biobase;
gcrma -> affy;
gcrma -> matchprobes;
gcrma -> splines;
RLMM -> MASS;
pgUtils -> Rdbi;
pgUtils -> RdbiPgSQL;
pgUtils -> methods;
affy -> Biobase;
affy -> methods;
affy -> utils;
affy -> affyio;
affy -> preprocessCore;
fdrame -> tcltk;
BiostringsCinterfaceDemo -> Biostrings;
Rgraphviz -> methods;
Rgraphviz -> utils;
Rgraphviz -> graph;
Rgraphviz -> grid;
affypdnn -> affy;
Rredland -> methods;
Rredland -> graph;
GenomeGraphs -> methods;
GenomeGraphs -> biomaRt;
GenomeGraphs -> grid;
marray -> limma;
marray -> methods;
arrayQualityMetrics -> Biobase;
arrayQualityMetrics -> geneplotter;
arrayQualityMetrics -> genefilter;
arrayQualityMetrics -> vsn;
arrayQualityMetrics -> RColorBrewer;
arrayQualityMetrics -> affyPLM;
arrayQualityMetrics -> simpleaffy;
arrayQualityMetrics -> lattice;
arrayQualityMetrics -> latticeExtra;
arrayQualityMetrics -> grid;
arrayQualityMetrics -> beadarray;
aroma.light -> R.methodsS3;